The XlinkX/PD Crosslink Export node exports the list of crosslinked peptides to a xiNET file, which you can import into the xiNET viewer, a web-based crosslink viewer1).

XlinkX/PD Crosslink Export node parameters

Parameter

Definition

xiNET Output Files Directory

Opens the Browse for Folder dialog box so that you can browse to the location where the xiNET files are saved.

Only Master Proteins

Determines whether the XlinkX algorithm exports only those crosslinked peptides from master proteins or crosslinked peptides from all proteins to the xiNET file.

  • (Default) True: Exports only master proteins to the xiNET file.
  • False: Exports all proteins to the xiNET file.