The XlinkX/PD Crosslink Grouping node lists the unique crosslinked peptides.

XlinkX/PD Crosslink Grouping parameter

Parameter

Definition

Ignore reporter scan identification

This option is active for the MS2_MS2 and MS2_MS3 workflows; when set to true, upon finalizing the peptide pair, the software will not take any identification from the reporter scan into account.

Default: false