The consensus workflow contains the following two extra nodes:

  • XlinkX/PD Crosslink Grouping node—which lists the unique crosslinked peptides
  • XlinkX/PD Consensus Validator node—to set the FDR thresholds

For information on the available consensus nodes, see Consensus workflow nodes, and refer to the Proteome Discoverer Help.

Consensus workflow using the XlinkX/PD Crosslink Grouping node
Consensus workflow using the XlinkX/PD Crosslink Grouping node