If the Annotations node is used in the workflow, there are annotation columns in the result file. For information on displaying and hiding columns, see Display the columns on the result pages.

The application represents each aspect of the annotations in the following columns:

  • GO Terms (biological processes, cellular components, molecular functions)
  • Pfam IDs
  • GO Accessions
  • Entrez Gene ID
  • Ensembl Gene ID
  • Gene ID
  • Reactome Pathway Accessions
  • Reactome Pathways
  • Wikipathway Accessions
  • Wikipathways

For information about adding annotations to a workflow, see Adding Protein Annotation to a Workflow.

User-defined annotation aspects in the results report, including GO Slim

NOTE

If the Molecular Function, Cellular Component, and Biological Processes columns are not visible on the Proteins page (they are visible by default), select them in the Field Chooser dialog box. If you want to see them, then the Protein Annotation node must be used in the Consensus workflow.

The application displays the results on the Proteins result page as colored boxes similar to those shown in the Annotations Server.