In addition to the Scripting Node provided, you can register your own node that runs a script. Your node can run in a consensus or processing workflow or as post-processing node. The rules for integrating your own scripting node are different than those for the provided Scripting Node.

Rules for adding nodes to workflows
Rules for adding nodes to workflows

Procedure

  1. To create a registered node, create a new subfolder under the \Tools\Scripts folder in the Proteome Discoverer installation folder.
  2. The default location is:
  3. C:\Program Files\Thermo\Proteome Discoverer 3.1\Tools\Scripts\MyScript
  4. Copy the script to this folder.
  5. Create a node.json file, and copy it to this folder.
  6. The node.json file is used to configure the input values for the script and the other nodes this standalone Scripting Node connects with.
  7. Example node.json file
    Example node.json file