The Quan Spectra page of the result report lists all the spectra that were used in reporter ion quantification. (The application generates the Quan Spectra page only if you include a Reporter Ions Quantification node in your processing workflow.)
It also displays quantification values for identified spectra and spectra that were quantified but not identified.
When you select a row on the Quan Spectra page, you can view data in the Quantification Channels view and the Quantification Spectrum view to see the details of the spectra used for quantification.
Task | Procedure |
|---|---|
Display the Quan Spectra page | Perform reporter ion quantification. Open the result report, and select the Quan Spectra tab. |
The columns of the Quan Spectra page are basically the same as those on the MS/MS Spectrum Info page. However, they also include reporter ion abundances of the intensity of the fragmented tag in a sample to the intensity of the fragmented tag in the control sample for all spectra, regardless of whether they have been identified.