The following table lists the parameters that you can use to configure the remote server that the Proteome Discoverer Daemon utility connects to.

Proteome Discoverer Daemon utility configuration parameters

Parameter

Definition

Current File Directory

Specifies the location where you want to store the output files.

Default location: C:\ProgramData\Thermo\Proteome Discoverer 3.1\PublicFiles

New Directory

Opens the Browse for Folder dialog box so that you can locate the user-named folder that is in the PublicFiles folder on the server where you want to store the output files.