The Annotation Server has default URLs for retrieving annotation sources. If for any reason these URLs change, you can edit them.

To change the URL and timeout settings the application uses when running a workflow that contains the Annotation Node, see Editing the workflow Annotation server settings.

Procedure

  1. Select Tools > Options.
  2. The Options dialog box opens.
  3. In the Options dialog box, select Annotation Server.
  4. The annotation server information appears.
  5. Options dialog box containing default information
    Options dialog box containing default information
  6. In the URL box under Annotation Service, enter the URL, including the placeholder ID.
  7. In the Annotation Display area, do the following:
  8. Enter the corresponding URL, including the placeholder ID, in the WikiPathways URL box.
  9. Enter the corresponding URL, including the placeholder ID, in the Reactome URL box.
  10. Do one of the following:
  11. If you want to use the URLs that you entered, select Test and then select Close.
  12. If you do not want to use the URLs that you entered, select Set to Factory Defaults and then select Yes.
  13. The Annotation Display parameters are reset to the default values.
  14. Select OK.