There are two Workflow Editor interfaces: an integrated Workflow Editor and a stand-alone Workflow Editor.
You can use both interfaces to view, create, edit, and save both individual processing workflows and consensus workflows. However, you can only use the integrated Workflow Editor to run analyses; you cannot do this with the stand-alone Workflow Editor.
For more information on the parameters of the two Workflow Editor interfaces and on how to access both interfaces, see the following topics:
- Working with the integrated Workflow Editor
- Working with the stand-alone Workflow Editor
- Workflow Editor Parameters in the Proteome Discoverer Help.
For instructions on using the Workflow Editor to create a workflow, see Create a workflow.