Summary of example analysis

Quan method

TMT 10plex

Quan channels

126, 127N, 127C = Control

128N, 128C, 129N = Insulin stimulation

129C, 130N, 130C = IGF-1 stimulation

131 = Pool of control, insulin, and IGF-1

Organism

Human

Instrument

Orbitrap Fusion Lumos

Acquisition method

TMT SPS MS3 (CID MS2, HCD MS3)

RAW file

20160307_A549_Phospho_1ug_CID_NL_trigger_top1_Lumos_01.raw

Located in the application media in the folder: Example RAW Files. Copy to a local directory.

Sample description

A single TMT 10plex experiment with three replicates each of a human cell line under control, insulin stimulated, and IGF-1 stimulated conditions as well as one pooled sample; and uniform enrichment for phosphopeptides

Disk space

1GB local drive space, SSD drive preferred

Processing time

Approximately 30 minutes

For more information about the experiment, refer to the related application note, A2025, “Sensitive and accurate quantitation of phosphopeptides using TMT isobaric labeling techniques” at: https://www.analyteguru.com/.