The Isoforms page displays all of the identified isoforms, as shown in the following figure. The Isoforms page also includes the UniProt description for each isoform and the mass in kDa, pI, and, if enabled, the protein annotations for gene ontologies and various pathway analysis.
Column | Description |
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Proteoform Characterization Confidence | Visual indication of C-Score confidence (>40=green, <40->3=yellow, <3=red). For information on defining the thresholds, see the PrSM Grouper node parameters. |
Accession | UniProt accession identifiers used to cite UniProt entries. |
Description | The protein description from UniProt. |
# Proteoforms | The number of identified proteoforms from the associated UniProt protein accession. |
# PrSMs | The number of PrSMs supporting this isoform assignment. |
# Characterized Proteoforms | The number of proteoforms having a C-Score greater than 40. |
Q-value | The chance of discovering the associated result given the experimental evidence. |