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In the case of jagged data sets, both Gaussian Smoothing or Savitzky-Golay Smoothing can be performed on the data set.
Smooth data
Procedure
- Select the Options tab of the m/z spectrum.
- Manipulate the sliders and settings as desired. For example, looking at the 26+ Charge State, you can take the G1F (x2) peak and attempt to smooth out the shoulder (pink dot).
- Enable either the Use Savitzky Smoothed Spectrum toggle or the Use Gaussian Smoothed Spectrum toggle to smooth the deconvoluted mass plot.
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Select Deconvolute again, because the data set was manipulated.