The Results tables on the Process and Review page display information about the components identified in your Peptide Mapping Analysis experiment, including identifications, modifications, sequence information, retention times, and more. Selecting a component row in a Results table populates the other panes on the Process and Review page with information related to the selected component.

Procedure

  1. Open the results of your experiment from the Queue page or from the Load Results page.
  2. See Open results.
  3. The Process and Review page opens by default and displays the results of your Peptide Mapping Analysis experiment, including one or more Results tables, tabbed together in the Results pane:
  4. Charge State Results: Displays charge-state specific results for each component found in the analysis. This table is produced for all BioPharma Finder Peptide Mapping Analysis tasks.
  5. See Charge State Results table parameters.
  6. Theoretical Digestion Results: Displays theoretical digestion results. This table is produced when you enable the Theoretical Digestion and Alias Naming feature on the Customize Results subpage of the Parameters page.
  7. See Theoretical Digestion Results table parameters.
  8. All Results tables are organized by components at the upper level and by raw data files at the lower level.
  9. By default, the table displays results at the component level (top-level data).
  10. In the Results pane, select the tab for the Results table you want to view.
  11. Select a component row in the table to populate the other panes in on the Process and Review page with information related to the selected component.
  12. If your analysis contains multiple raw data files, you can view results related to a specific raw data file for each component (lower-level data). Select the plus icon (+) in the left margin of a component row to display the component information at the raw data file level.
Figure Charge State Results table on the Process and Review page
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  1. You can change the reference condition used in the Results table as necessary.
  2. See Change the reference condition.
  3. You can export the Results table as an Excel workbook (.xlsx), text file (.csv), Mascot generic format (.mgf) file, or BioPharma Finder (.bpf) file. You can also export selected components to a peptide workbook to use in targeted peptide mapping experiments or with the Chromeleon chromatography data system.
  4. See Export the Results table and Save experiment results to a target peptide workbook.

TIP

On the Process and Review page, you can use real-time optimization to quickly change processing method parameters and update the data in the Results tables.