You must assign a processing method to each experiment. The processing method you select specifies the identification, component detection, and other parameters that the application uses to process your experiment.

The following table displays the default processing methods included for each workflow.

Default processing methods

Workflow

Default processing methods

Peptide Mapping Analysis

  • Basic Default Method
  • Disulfide Bond Default Method
  • HDX Default Method
  • Targeted Default Method
  • Default Host Cell Protein Method

Oligonucleotide Analysis

  • Basic Default Method

Intact Mass Analysis

  • Default ReSpect
  • Default SW ReSpect
  • Default Xtract
  • Default SW Xtract
  • Default Native
  • Default Native Above 1 Million
  • Default IonTrap, ISQ, and TSQ
  • Default ADC
  • Default Auto ReSpect
  • Default Auto Xtract
  • Pierce Intact Protein Standard Mix High Res LC Method
  • Pierce Intact Protein Standard Mix Low Res LC Method
  • Pierce Intact Protein Standard Mix High Res Infusion Method
  • Pierce Intact Protein Standard Mix Low Res Infusion Method
  • Default Oligo ReSpect
  • Default Oligo Xtract

Top Down Analysis

  • Top Down Default Method

You can use a default processing method or create and save a custom processing method by editing one of the default methods. You can also import and export custom method files as necessary.