The Report subpage of the processing method editing wizard displays the sections you can add to the deconvolution report for an Intact Mass Analysis experiment.
Select the checkbox for each report section you want to generate and display in the deconvolution report.
IMPORTANT
The BioPharma Finder application does not support the Intact Mass Analysis Report feature for drug-antibody ratio (DAR)-enabled experiments or experiments with the Multiconsensus results format.
The Report subpage of the processing method editing wizard is inactive for these experiment types.
| No. | Description | No. | Description |
|---|---|---|---|
1 | Parameters tab (processing method editing wizard) | 3 | Reporting Parameters area |
2 | Subpage navigation bar | 4 | Automation Parameters area (Automatic mode experiments only) |
The following table describes the parameters on the Report page.
Parameter | Description |
|---|---|
Reporting Parameters area | |
Sample Information | Generates the Sample Information section of the report. |
Chromatogram with Parameters | Generates the Chromatogram Parameters and Chromatogram sections of the report. |
Source Spectrum | Generates the Source Spectrum section of the report. |
Deconvolution Parameters | Generates the Main Parameters, Advanced Parameters, Source Spectra Parameters, and Sequences Information sections of the report. |
Deconvoluted Spectrum | Generates the Deconvoluted Spectrum section of the report. |
Components Table | Generates the Masses Table section of the report, which displays information from the Results table on the Process and Review page. |
Component Detail Tables | Generates the Monoisotopic Mass table (for Xtract) or Average Mass table (for ReSpect) for each component in the Component Detail Tables section of the report. |
Component Source of Evidence Plots | Generates the Source Spectrum Evidence Plot section for each component in the Component Detail Tables section of the report. |
Automation Parameters area The options in this pane apply to experiments processed in Automatic mode only. | |
Save to PDF | When selected (default), saves the generated deconvolution report (as a .pdf file) in the same folder as the raw data files, using the following file name format: RawFileName_ExperimentName.pdf |
Auto Print | When selected, automatically prints the generated deconvolution report. When you select this option, the Select a Printer box becomes available so that you can select a printer. |
Save to .jpg | When selected (default), saves the chromatographic peak data to both a .jpg file and .csv file. When cleared, saves chromatographic peak data only to a .csv file. For an Average Over Selected Retention Time/Auto Peak Detection experiment, the application saves each peak to an individual file. For a Sliding Windows experiment, it saves all peaks to one file. The file names have the following format: RawFileName_ExperimentName_ScanRange_DateStamp_TimeStamp_[AM|PM]_[XT|RSP]_AUTO.jpg RawFileName_ExperimentName_ScanRange_DateStamp_TimeStamp_[AM|PM]_[XT|RSP]_AUTO.csv where XT refers to Xtract and RSP refers to ReSpect. |
Concatenate All Reports | When selected (default), combines all reports for all deconvoluted spectra from the same raw data file into one deconvolution report (.pdf file). When cleared, creates a deconvolution report file (.pdf file) for each chromatographic peak in the raw data file. |
Select a Printer | Displays a list of available printers that can print the deconvolution report (.pdf file). This option becomes available when you select the Auto Print option. |