Residue Properties and Modifications dialog box parameters and commands - BioPharma Finder Software - Intact Mass Analysis User Guide - Assign modifications to a protein sequence - Create protein sequences - Manage static modifications - Residue Properties and Modifications dialog box parameters and commands - BioPharma Finder Software

Residue Properties and Modifications dialog box parameters and commands - BioPharma Finder Software - Intact Mass Analysis User Guide - Assign modifications to a protein sequence - Create protein sequences - Manage static modifications - Residue Properties and Modifications dialog box parameters and commands - BioPharma Finder Software - BioPharma Finder Software

Intact Mass Analysis User Guide

Product Tree

Ardia Platform > Software > BioPharma Finder Software

Desktop Software > BioPharma Finder Software

Document Type

User Guide

Software version

5.3

The following table describes the parameters in the Residue Properties and Modifications dialog box in the Protein Sequence Editor.

Residue Properties and Modifications dialog box parameters
Parameter	Description
Residue Properties area
Residue	Displays the amino acid letter code of the selected residue.
At	Displays the number of the chain and site location of the selected residue.
Mono. Mass	Displays the monoisotopic mass of the residue.
Avg. Mass	Displays the average mass of the residue.
Side Chain/N-Terminal/C-Terminal Modification area
(Dropdown list)	Displays a list of the available side-chain, N-terminal, or C-terminal modifications.
Mono. Mass	Displays the monoisotopic mass of the modification selected from the dropdown list.
Avg. Mass	Displays the average mass of the modification selected from the dropdown list.
Apply to All (checkbox) (Side Chain Modification area)	Applies the selected modification to all instances of the selected residue in the protein sequence.

The following table describes the commands in the Residue Properties and Modifications dialog box in the Protein Sequence Editor.

Residue Properties and Modifications dialog box parameters
Parameter	Description
Residue Properties area
Residue	Displays the amino acid letter code of the selected residue.
At	Displays the number of the chain and site location of the selected residue.
Mono. Mass	Displays the monoisotopic mass of the residue.
Avg. Mass	Displays the average mass of the residue.
Side Chain/N-Terminal/C-Terminal Modification area
(Dropdown list)	Displays a list of the available side-chain, N-terminal, or C-terminal modifications.
Mono. Mass	Displays the monoisotopic mass of the modification selected from the dropdown list.
Avg. Mass	Displays the average mass of the modification selected from the dropdown list.
Apply to All (checkbox) (Side Chain Modification area)	Applies the selected modification to all instances of the selected residue in the protein sequence.