The following table describes the information in the Sequence Manager table.

Sequence Manager table information

Column

Description

Name

Displays the name of the sequence.

Sample Type

Displays the sample type of the sequence:

  • Protein
  • Oligonucleotide

Category

Displays the category of the sequence.

For proteins:

  • Peptide Mapping
  • Intact Protein
  • Top Down

For oligonucleotides:

  • Sequencing
  • Intact Deconvolution

Last Modified Time

Displays the date and time that you last modified the sequence.

Average Mass

Displays the average mass of the sequence.

Monoisotopic Mass

Displays the monoisotopic mass of the sequence.

Num. of Chains

Displays the number of chains in the sequence.

Max. Num. of Modifications

Displays the maximum number of modifications for the sequence.

This number is specified by a category-specific parameter in the Sequence Editor:

  • Peptide Mapping Analysis: Variable Modifications for Intact and Peptide Analysis pane > Max # Modifications
  • Oligonucleotide Analysis: Assign Variable Modifications pane > Max # Modifications
  • Intact Mass Analysis: Variable Modifications for Intact and Peptide Analysis pane > Max # Modifications
  • Top Down Analysis: Site Specific Variable Modifications for Top Down Analysis pane > Number of Modifications per Proteoform

Protein Glycosylation/Oligo Terminal truncation

For protein sequences, displays the selected glycosylation in the protein sequence or None.

For oligonucleotide sequences with the "Intact Deconvolution" category, displays Enabled (if Terminal Truncation Search is enabled) or None.

Num. of Proteoforms

For protein sequences with the "Top Down" category, displays the total number of proteoforms generated.

Variable Modifications

Displays all of the variable modifications in the sequence.

Protein Static Modifications/Oligonucleotide Building Blocks

Displays all of the static modifications in protein sequences and the oligonucleotide building blocks in oligonucleotide sequences.

Specificity

For oligonucleotide sequences with the "Intact Deconvolution" category and the Terminal Truncation Search enabled, displays the specificity for the sequence truncation:

  • Remove from 3'
  • Remove from 5'

Sequence Length

Displays the total number of amino acids (in a protein sequence) or nucleotide bases (in an oligonucleotide sequence).

Description

Displays a description for each sequence (if applicable).