The following table describes the parameters on the left side of the Identification page.
To activate these parameters for processing full-scan MS data, you must select the Intact Deconvolution checkbox on the Parameters > Component Detection page for at least one peak.
Parameter | Description |
|---|---|
Sequence Matching Mass Tolerance | Specifies the mass tolerance (in ppm or Da) within which the mass of the full protein sequence and individual components must fall to be considered a match. |
Multiconsensus Component Merge These parameters control the merging of the full-scan MS deconvoluted results for multiple raw data files when you select Multiconsensus as the result format on the Top Down Analysis page. | |
Deconvolution Mass Tolerance | Specifies the mass tolerance (in ppm or Da) that components from individual raw data files must meet to be merged into a multiconsensus component. The application excludes individual raw data file components whose masses differ by more than this tolerance from a multiconsensus component. |
RT Tolerance | Specifies the maximum difference in retention time (RT) that components from individual files must meet to be merged into a multiconsensus component. The application excludes individual raw data file components whose retention times are separated by more than this gap from a multiconsensus component. |
Minimum Number of Required Occurrences | Specifies the minimum number of individual raw data files that must be included in a multiconsensus component for it to be considered valid. The application excludes multiconsensus components comprised of fewer than this number of files. |