The following table describes the commands and parameters on the Queue page.

Queue page parameters

Parameter

Description

Command bar

Stop/Pause/Run

(For the peptide mapping analysis, oligonucleotide analysis, and top down analysis workflows only) The Stop button cancels the processing of the currently running job and pauses the queue. The button changes to Run.

(For the intact mass analysis workflow only) The Pause completes the processing of the currently running job and pauses the queue. The button changes to Run.

Run resumes the processing of the remaining jobs in the queue. The button changes to Stop or Pause.

Queue Manipulation

Contains commands that you use to remove jobs from the queue.

Remove Selected

Removes the selected job or jobs from the queue.

Remove Completed

Removes all completed jobs from the queue.

Remove All

Removes all jobs from the queue.

Open Results

Transfers you to the Process and Review page; enabled for completed jobs.

Open Report

(For intact mass analysis only) Transfers you to the Reporting page to view the resulting report; enabled for completed jobs.

Queue table

Record Number

Displays a sequential number that identifies each experiment in the queue.

Experiment Name

Displays the name of the experiment.

Status

Displays the real-time status of the analysis:

  • Submitted: The experiment is waiting for processing.
  • Running: The application is analyzing the experiment.
  • Completed: The application has finished analyzing the experiment and has generated the results (and reports for intact mass analysis).
  • (For intact mass analysis only) Completed, Report Not Concatenated: The application has finished analyzing the experiment but has not generated the reports because of size constraints.
  • Cancelled: You stopped the processing of the experiment, so the application did not generate the results (or reports for intact mass analysis).
  • Aborted: The application crashed or stopped during the processing and cannot generate the results (or reports for intact mass analysis).
  • Error, possible memory issue, cannot continue the execution of current operation: There is not enough memory to process the job.
  • If the application cannot process a job, be sure that the type of data being processed is appropriate.
  • Reduce the amount of data being processed by adjusting the retention time range, S/N threshold, or m/z range.
  • Then, restart the application if needed and resubmit the experiment for processing.

Experiment Type

Displays the type of experiment: Peptide Mapping, Oligonucleotide, Intact, or Top Down.

Method Name

Displays the processing method used to run the experiment.

Method Type

(For peptide mapping analysis only) Displays the type of peptide mapping method: Non Targeted or Targeted.

Sequence Names

(Optional) Displays the name of the protein sequence or sequences assigned to the experiment.

Raw File Names

Displays the name of the raw data file or files loaded for the experiment.

Source Spectra Method

(For intact mass analysis only) Displays the method used to select the source spectra for deconvolution: Sliding Windows, Auto Peak Detection, or Average Over Selected Retention Time.

Deconvolution Algorithm

(For intact mass analysis only) Displays the algorithm used for deconvolution: Xtract (Isotopically Resolved) or ReSpect (Isotopically Unresolved).

Number of Chromatographic Peaks

(For intact mass analysis average over selected retention time deconvolution or auto peak detection experiments only) Displays the number of chromatographic peaks detected in the spectrum. If the application finds no chromatographic peaks, the value is 0.

Number of Components Detected

(For intact mass analysis only) Displays the number of components detected from the deconvolution of each averaged spectrum from all found chromatographic peaks. If the application finds no chromatographic peaks, the value is 0.

Submit Time

Displays the date and time that you placed the experiment into the run queue.

Start Time

Displays the date and time that the processing started for the given experiment.

Completion Time

Displays the date and time that the processing finished for the given experiment.

Total Processing Time (min)

Displays the total time used to process the given experiment.